Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907698.1_cds_XP_016457807.1_51496
CDS Infomation

[gene=LOC107781588] [db_xref=GeneID:107781588] [protein=probable protein phosphatase 2C 25] [protein_id=XP_016457807.1] [location=join(9736..10245,11023..11361,11470..11811)] [gbkey=CDS]
Sequence

ATGTCTTGTACCGTCGCCATTTCAAATTCACTGGCGTTCTCGCCGGTGGCTAGGGTTCCG
GTGACCAAATCTCCCCTCTGTAAATCAGCTTCATTTTCTTCTTCTTCTTCTCCTAATTCA
TCTAAAACCCTAACGAAATTCCCTTCCTTTACCTCCTCTTCTTCTTCTTCTTCTTCTCCG
TCTTTACAATTTCAAATTCTTCGGTTTCAGAAGCCATTACCAGTACCTGCACCGGCGCCT
ATTAACCTTATTAGAAATTCTAAGGAATGTTCTACTTCTGCGCCGAATTCTACTTCTCCG
ACGGTTTTGAAGAGGAAGAGACCTGCTAAACTGGATATTCCGATTGTTTCGACGACTTTT
GGGAATTTTCTGGCGAATCCGGCAGCTGCGACGGCGGATTTTGTGGAGGTTGAGGGTGAT
GGGTATTATGTTTGTTGTAAGCGTGGAAGGAGAGGTCCGATGGAGGATCGTTACTCTGCA
CTTGTCAATTTACAAGGAGATTCTAAAGAGGGTATTTTTGGTATATTTGATGGACATGGA
GGAGCTAAAGCTGCAGAGTTTGCAGCAGAAAACTTGAATAAGAACATTATGGACGAGCTA
GTAACGAGGAAAGATGAAGATGTCGTGGAGGCGGTCAAAAACGGTTATTTGAAGACAGAT
TCCGAATTTCTCAACCAAGAATTTCGGGGTGGATCATGCTGTGTAACAGCATTGATCAGG
AATGGCGATTTAGTGGTATCCAATGCTGGCGATTGTCGTGCAGTTGTTAGTCGAGATGGG
ATTGCTGAAGCACTCACTTCGGATCATAAGCCTTCAAGGACGGACGAGAAGGACAGAATT
GAGACTTTGGGTGGCTATGTAGATTGTTGTAGTAGTGTTTGGAGAATCCAGGGATCTCTT
GCTGTGTCAAGAGGTATTGGAGATCGGTATCTTAAACAATGGATAACTGCAGAGCCTGAG
ACAAAGATCGTCGGGCTTAATCCTGAATTGGAGTTCTTAGTTCTTGCATCGGATGGTTTA
TGGGATAAAGTCAGCAATCAGGAAGCAGTAGATGCTGCTAGGCCTTTGTGCACAGACATC
AGTAAGCCACAACCCTTGTCGGCCTCTAAAAGCCTCATTGATCTTGCTGTTTCACGAGGT
TCTGTTGATGATATAAGTGTGATGATAATTCAACTGCAGCAATTTTGCTGA

Peptide Sequence

PEP ID

XP_016457807.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 25 [Nicotiana tabacum]
Sequence

MSCTVAISNSLAFSPVARVPVTKSPLCKSASFSSSSSPNSSKTLTKFPSFTSSSSSSSSP
SLQFQILRFQKPLPVPAPAPINLIRNSKECSTSAPNSTSPTVLKRKRPAKLDIPIVSTTF
GNFLANPAAATADFVEVEGDGYYVCCKRGRRGPMEDRYSALVNLQGDSKEGIFGIFDGHG
GAKAAEFAAENLNKNIMDELVTRKDEDVVEAVKNGYLKTDSEFLNQEFRGGSCCVTALIR
NGDLVVSNAGDCRAVVSRDGIAEALTSDHKPSRTDEKDRIETLGGYVDCCSSVWRIQGSL
AVSRGIGDRYLKQWITAEPETKIVGLNPELEFLVLASDGLWDKVSNQEAVDAARPLCTDI
SKPQPLSASKSLIDLAVSRGSVDDISVMIIQLQQFC

Transcript Sequence

Gene sequence data has not been registered.